Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Alms1Q8K4E0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Gm6550-201ENSMUST00000187574 993 ntBASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.97■□□□□ 0.15
Alms1Q8K4E0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Alms1Q8K4E0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Alms1Q8K4E0 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.96■□□□□ 0.14
Alms1Q8K4E0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Alms1Q8K4E0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Alms1Q8K4E0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.96■□□□□ 0.14
Alms1Q8K4E0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Alms1Q8K4E0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Gm5186-201ENSMUST00000218781 920 ntBASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Chchd1-203ENSMUST00000224633 557 ntBASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Gm15173-201ENSMUST00000122049 433 ntBASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Gm29707-201ENSMUST00000196325 491 ntBASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Gm7506-201ENSMUST00000207758 815 ntBASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Alms1Q8K4E0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Gm27628-201ENSMUST00000184911 107 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms