Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.46■□□□□ 0.07
Clrn1Q8K445 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Clrn1Q8K445 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Clrn1Q8K445 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Clrn1Q8K445 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Clrn1Q8K445 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Clrn1Q8K445 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Clrn1Q8K445 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.46■□□□□ 0.06
Clrn1Q8K445 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Gm29707-201ENSMUST00000196325 491 ntBASIC15.45■□□□□ 0.06
Clrn1Q8K445 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.45■□□□□ 0.06
Clrn1Q8K445 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Clrn1Q8K445 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Clrn1Q8K445 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.43■□□□□ 0.06
Clrn1Q8K445 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms