Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shtn1Q8K2Q9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Shtn1Q8K2Q9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Auts2-212ENSMUST00000178555 309 ntBASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shtn1Q8K2Q9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Gm4459-201ENSMUST00000118750 468 ntBASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Gm10576-201ENSMUST00000191927 825 ntBASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Gm10175-201ENSMUST00000086013 645 ntBASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shtn1Q8K2Q9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shtn1Q8K2Q9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shtn1Q8K2Q9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shtn1Q8K2Q9 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shtn1Q8K2Q9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms