Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.91■□□□□ 0.62
Rtn1Q8K0T0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn1Q8K0T0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
Rtn1Q8K0T0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rtn1Q8K0T0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.91■□□□□ 0.62
Rtn1Q8K0T0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Gm7977-201ENSMUST00000193787 748 ntBASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.9■□□□□ 0.62
Rtn1Q8K0T0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rtn1Q8K0T0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rtn1Q8K0T0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rtn1Q8K0T0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rtn1Q8K0T0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtn1Q8K0T0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rtn1Q8K0T0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtn1Q8K0T0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Gm10052-201ENSMUST00000168019 960 ntBASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Gm7729-201ENSMUST00000050143 801 ntBASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtn1Q8K0T0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms