Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rfwd3Q8CIK8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Gm37722-201ENSMUST00000193757 208 ntBASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rfwd3Q8CIK8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfwd3Q8CIK8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Gm25016-201ENSMUST00000158399 131 ntBASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Gm5587-201ENSMUST00000206270 674 ntBASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfwd3Q8CIK8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.39■□□□□ 0.05
Rfwd3Q8CIK8 AA414768-201ENSMUST00000121924 1257 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms