Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne4Q8CII8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne4Q8CII8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
Syne4Q8CII8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syne4Q8CII8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne4Q8CII8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syne4Q8CII8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.5■□□□□ 0.55
Syne4Q8CII8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.5■□□□□ 0.55
Syne4Q8CII8 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.49■□□□□ 0.55
Syne4Q8CII8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.49■□□□□ 0.55
Syne4Q8CII8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.49■□□□□ 0.55
Syne4Q8CII8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syne4Q8CII8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.48■□□□□ 0.55
Syne4Q8CII8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Mir8117-201ENSMUST00000184773 107 ntBASIC18.48■□□□□ 0.55
Syne4Q8CII8 Gm36967-201ENSMUST00000193814 266 ntBASIC18.48■□□□□ 0.55
Syne4Q8CII8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.48■□□□□ 0.55
Syne4Q8CII8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.47■□□□□ 0.55
Syne4Q8CII8 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.47■□□□□ 0.55
Syne4Q8CII8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Auts2-212ENSMUST00000178555 309 ntBASIC18.47■□□□□ 0.55
Syne4Q8CII8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.47■□□□□ 0.55
Syne4Q8CII8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syne4Q8CII8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Syne4Q8CII8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.45■□□□□ 0.54
Syne4Q8CII8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.45■□□□□ 0.54
Syne4Q8CII8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.45■□□□□ 0.54
Syne4Q8CII8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.45■□□□□ 0.54
Syne4Q8CII8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Syne4Q8CII8 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms