Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Depdc1aQ8CIG0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Depdc1aQ8CIG0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Depdc1aQ8CIG0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Gm7506-201ENSMUST00000207758 815 ntBASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Rps4l-201ENSMUST00000071745 943 ntBASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1aQ8CIG0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1aQ8CIG0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Gm25406-201ENSMUST00000157599 105 ntBASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Mir6404-201ENSMUST00000183699 94 ntBASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1aQ8CIG0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1aQ8CIG0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Depdc1aQ8CIG0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms