Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Gm10013-201ENSMUST00000106074 672 ntBASIC16.52■□□□□ 0.24
Clip4Q8CI96 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clip4Q8CI96 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Clip4Q8CI96 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Gm6659-201ENSMUST00000174752 547 ntBASIC16.51■□□□□ 0.23
Clip4Q8CI96 Gm22697-201ENSMUST00000175194 63 ntBASIC16.51■□□□□ 0.23
Clip4Q8CI96 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clip4Q8CI96 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Gm18101-201ENSMUST00000215769 548 ntBASIC16.5■□□□□ 0.23
Clip4Q8CI96 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Clip4Q8CI96 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clip4Q8CI96 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms