Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc4Q8CG47 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc4Q8CG47 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Gm7461-201ENSMUST00000058918 827 ntBASIC20.12■□□□□ 0.81
Smc4Q8CG47 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc4Q8CG47 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Mir8098-201ENSMUST00000184011 137 ntBASIC20.11■□□□□ 0.81
Smc4Q8CG47 Gm27867-201ENSMUST00000184778 125 ntBASIC20.11■□□□□ 0.81
Smc4Q8CG47 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc4Q8CG47 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.1■□□□□ 0.81
Smc4Q8CG47 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.1■□□□□ 0.81
Smc4Q8CG47 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc4Q8CG47 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.09■□□□□ 0.81
Smc4Q8CG47 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smc4Q8CG47 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc4Q8CG47 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc4Q8CG47 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc4Q8CG47 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc4Q8CG47 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Smc4Q8CG47 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.08■□□□□ 0.81
Smc4Q8CG47 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.08■□□□□ 0.81
Smc4Q8CG47 Gm5864-201ENSMUST00000202263 970 ntBASIC20.08■□□□□ 0.81
Smc4Q8CG47 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.08■□□□□ 0.81
Smc4Q8CG47 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.08■□□□□ 0.81
Smc4Q8CG47 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms