Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb7Q8CDY9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb7Q8CDY9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb7Q8CDY9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb7Q8CDY9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb7Q8CDY9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Gm16061-201ENSMUST00000122167 857 ntBASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb7Q8CDY9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Gm15565-201ENSMUST00000118890 427 ntBASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Gm43799-201ENSMUST00000201845 579 ntBASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdhb7Q8CDY9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb7Q8CDY9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms