Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Lrif1Q8CDD9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrif1Q8CDD9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Gm37292-201ENSMUST00000192062 758 ntBASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrif1Q8CDD9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lrif1Q8CDD9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Lrif1Q8CDD9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lrif1Q8CDD9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lrif1Q8CDD9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Lrif1Q8CDD9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lrif1Q8CDD9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrif1Q8CDD9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrif1Q8CDD9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrif1Q8CDD9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lrif1Q8CDD9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms