Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Gm18062-201ENSMUST00000208020 547 ntBASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Gm18055-201ENSMUST00000208254 547 ntBASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pabpn1Q8CCS6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Gm15358-201ENSMUST00000119249 520 ntBASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Gm28631-201ENSMUST00000190740 334 ntBASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Gm43630-201ENSMUST00000201550 776 ntBASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Pabpn1Q8CCS6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC25.28■■□□□ 1.64
Pabpn1Q8CCS6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pabpn1Q8CCS6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Pabpn1Q8CCS6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC25.28■■□□□ 1.64
Pabpn1Q8CCS6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Gm14928-201ENSMUST00000120198 477 ntBASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Mir6404-201ENSMUST00000183699 94 ntBASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Gm38294-201ENSMUST00000192831 381 ntBASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pabpn1Q8CCS6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Gm13453-201ENSMUST00000118708 357 ntBASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Gm44855-201ENSMUST00000205725 362 ntBASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pabpn1Q8CCS6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Gm16215-201ENSMUST00000161990 637 ntBASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 AC151836.1-202ENSMUST00000226259 753 ntBASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pabpn1Q8CCS6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Gm8344-201ENSMUST00000119813 856 ntBASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pabpn1Q8CCS6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pabpn1Q8CCS6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms