Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc46a2Q8CA03 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Slc46a2Q8CA03 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Gm13168-201ENSMUST00000121771 632 ntBASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Gm18958-201ENSMUST00000174258 762 ntBASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Slc46a2Q8CA03 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Slc46a2Q8CA03 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Actl10-202ENSMUST00000226583 1501 ntBASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Slc46a2Q8CA03 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms