Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Uba3Q8C878 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Uba3Q8C878 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Uba3Q8C878 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Uba3Q8C878 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Uba3Q8C878 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Uba3Q8C878 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Uba3Q8C878 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Gm33142-201ENSMUST00000193913 867 ntBASIC17.24■□□□□ 0.35
Uba3Q8C878 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Uba3Q8C878 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.24■□□□□ 0.35
Uba3Q8C878 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.24■□□□□ 0.35
Uba3Q8C878 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Uba3Q8C878 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Uba3Q8C878 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Uba3Q8C878 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Haglr-201ENSMUST00000100000 2085 ntBASIC17.23■□□□□ 0.35
Uba3Q8C878 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Uba3Q8C878 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Uba3Q8C878 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Uba3Q8C878 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Uba3Q8C878 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.22■□□□□ 0.35
Uba3Q8C878 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.22■□□□□ 0.35
Uba3Q8C878 Gm7284-201ENSMUST00000131667 944 ntBASIC17.22■□□□□ 0.35
Uba3Q8C878 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Gm27704-201ENSMUST00000185094 107 ntBASIC17.22■□□□□ 0.35
Uba3Q8C878 Gm45328-201ENSMUST00000210942 917 ntBASIC17.22■□□□□ 0.35
Uba3Q8C878 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Uba3Q8C878 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Uba3Q8C878 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.21■□□□□ 0.35
Uba3Q8C878 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Uba3Q8C878 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Uba3Q8C878 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.21■□□□□ 0.35
Uba3Q8C878 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.21■□□□□ 0.35
Uba3Q8C878 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Uba3Q8C878 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Uba3Q8C878 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms