Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Gm15165-201ENSMUST00000118140 502 ntBASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Gm44454-201ENSMUST00000198541 138 ntBASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Gm6296-201ENSMUST00000222599 943 ntBASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp20Q8C6M1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp20Q8C6M1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Gm18733-201ENSMUST00000173950 856 ntBASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp20Q8C6M1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44357-201ENSMUST00000195897 142 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm19658-201ENSMUST00000196231 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44367-201ENSMUST00000196836 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44350-201ENSMUST00000197197 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44390-201ENSMUST00000197533 144 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44313-201ENSMUST00000198018 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44486-201ENSMUST00000198508 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44314-201ENSMUST00000199263 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44394-201ENSMUST00000199558 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44484-201ENSMUST00000199873 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44466-201ENSMUST00000200264 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm44359-201ENSMUST00000200671 138 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Gm6376-201ENSMUST00000209407 580 ntBASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp20Q8C6M1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms