Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc60Q8C4J0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Gm7284-201ENSMUST00000131667 944 ntBASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Gm36967-201ENSMUST00000193814 266 ntBASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ccdc60Q8C4J0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Gm15794-201ENSMUST00000120182 631 ntBASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc60Q8C4J0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Gm10052-201ENSMUST00000168019 960 ntBASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Gm27704-201ENSMUST00000185094 107 ntBASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Gm7729-201ENSMUST00000050143 801 ntBASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.86■□□□□ 0.93
Ccdc60Q8C4J0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc60Q8C4J0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc60Q8C4J0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms