Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ptcd1Q8C2E4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Gm25990-201ENSMUST00000102440 86 ntBASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Gm13418-201ENSMUST00000119097 944 ntBASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Gm7230-201ENSMUST00000173026 815 ntBASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ptcd1Q8C2E4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Gm14822-201ENSMUST00000122247 291 ntBASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Gm25745-201ENSMUST00000174945 133 ntBASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Gm10576-201ENSMUST00000191927 825 ntBASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ptcd1Q8C2E4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ptcd1Q8C2E4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Gm4535-201ENSMUST00000182274 558 ntBASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Gm10355-201ENSMUST00000097146 517 ntBASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ptcd1Q8C2E4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ptcd1Q8C2E4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ptcd1Q8C2E4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ptcd1Q8C2E4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ptcd1Q8C2E4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ptcd1Q8C2E4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Ptcd1Q8C2E4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Gm4995-201ENSMUST00000117247 432 ntBASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ptcd1Q8C2E4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms