Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Gm15565-201ENSMUST00000118890 427 ntBASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Gm13836-201ENSMUST00000121159 501 ntBASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Gm9731-201ENSMUST00000209480 747 ntBASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps9d1Q8C190 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Gm12085-201ENSMUST00000119263 940 ntBASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps9d1Q8C190 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.34■□□□□ 0.05
Vps9d1Q8C190 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Timm23-208ENSMUST00000226683 750 ntBASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps9d1Q8C190 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Vps9d1Q8C190 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps9d1Q8C190 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Vps9d1Q8C190 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Vps9d1Q8C190 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Mir5122-201ENSMUST00000175004 89 ntBASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps9d1Q8C190 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.33■□□□□ 0.04
Vps9d1Q8C190 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms