Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.08■□□□□ 0.33
Sh3rf3Q8C120 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3rf3Q8C120 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3rf3Q8C120 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sh3rf3Q8C120 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3rf3Q8C120 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3rf3Q8C120 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3rf3Q8C120 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sh3rf3Q8C120 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf3Q8C120 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Gm18101-201ENSMUST00000215769 548 ntBASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf3Q8C120 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Gm27389-201ENSMUST00000183622 195 ntBASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf3Q8C120 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Gm37722-201ENSMUST00000193757 208 ntBASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf3Q8C120 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Sh3rf3Q8C120 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf3Q8C120 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf3Q8C120 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms