Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.48□□□□□ -0.09
SprnQ8BWU1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SprnQ8BWU1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SprnQ8BWU1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.48□□□□□ -0.09
SprnQ8BWU1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Gm37055-201ENSMUST00000191866 133 ntBASIC14.47□□□□□ -0.09
SprnQ8BWU1 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.47□□□□□ -0.09
SprnQ8BWU1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SprnQ8BWU1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SprnQ8BWU1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SprnQ8BWU1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SprnQ8BWU1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SprnQ8BWU1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SprnQ8BWU1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SprnQ8BWU1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SprnQ8BWU1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.45□□□□□ -0.1
SprnQ8BWU1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.45□□□□□ -0.1
SprnQ8BWU1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SprnQ8BWU1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.44□□□□□ -0.1
SprnQ8BWU1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Gm12382-201ENSMUST00000122005 922 ntBASIC14.44□□□□□ -0.1
SprnQ8BWU1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SprnQ8BWU1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms