Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trank1Q8BV79 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14□□□□□ -0.17
Trank1Q8BV79 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trank1Q8BV79 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14□□□□□ -0.17
Trank1Q8BV79 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Trank1Q8BV79 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14□□□□□ -0.17
Trank1Q8BV79 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
Trank1Q8BV79 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14□□□□□ -0.17
Trank1Q8BV79 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trank1Q8BV79 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trank1Q8BV79 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trank1Q8BV79 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trank1Q8BV79 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trank1Q8BV79 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trank1Q8BV79 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.98□□□□□ -0.17
Trank1Q8BV79 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.98□□□□□ -0.17
Trank1Q8BV79 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.98□□□□□ -0.17
Trank1Q8BV79 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.98□□□□□ -0.17
Trank1Q8BV79 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.98□□□□□ -0.17
Trank1Q8BV79 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trank1Q8BV79 Gm2423-201ENSMUST00000074863 733 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms