Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf7Q8BTV2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf7Q8BTV2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Il3ra-202ENSMUST00000223589 738 ntBASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf7Q8BTV2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Gm10698-201ENSMUST00000182663 604 ntBASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf7Q8BTV2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Gm15378-201ENSMUST00000121894 207 ntBASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpsf7Q8BTV2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms