Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rd3Q8BRE0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.33■□□□□ 0.37
Rd3Q8BRE0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rd3Q8BRE0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rd3Q8BRE0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rd3Q8BRE0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rd3Q8BRE0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Gm27525-201ENSMUST00000184465 107 ntBASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.33■□□□□ 0.36
Rd3Q8BRE0 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rd3Q8BRE0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rd3Q8BRE0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Gm7506-201ENSMUST00000207758 815 ntBASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rd3Q8BRE0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms