Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cpsf4Q8BQZ5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Gm22697-201ENSMUST00000175194 63 ntBASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cpsf4Q8BQZ5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Cpsf4Q8BQZ5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Gm13474-201ENSMUST00000122466 815 ntBASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Gm10566-201ENSMUST00000086739 996 ntBASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cpsf4Q8BQZ5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Gm27000-201ENSMUST00000182943 842 ntBASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Gm7213-201ENSMUST00000215977 950 ntBASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cpsf4Q8BQZ5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Gm10013-201ENSMUST00000106074 672 ntBASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms