Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col16a1Q8BLX7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Gm4899-201ENSMUST00000178708 719 ntBASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col16a1Q8BLX7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Gm37153-201ENSMUST00000193637 231 ntBASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Gm17968-201ENSMUST00000194902 784 ntBASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col16a1Q8BLX7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21.34■■□□□ 1.01
Col16a1Q8BLX7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC21.33■■□□□ 1.01
Col16a1Q8BLX7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col16a1Q8BLX7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Col16a1Q8BLX7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Gm45167-201ENSMUST00000208007 322 ntBASIC21.32■■□□□ 1
Col16a1Q8BLX7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21.32■■□□□ 1
Col16a1Q8BLX7 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.32■■□□□ 1
Col16a1Q8BLX7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC21.32■■□□□ 1
Col16a1Q8BLX7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Col16a1Q8BLX7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms