Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdhr3Q8BL00 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cdhr3Q8BL00 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Gm13186-201ENSMUST00000118031 316 ntBASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Odf3b-204ENSMUST00000227834 930 ntBASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdhr3Q8BL00 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Gm20760-201ENSMUST00000179197 648 ntBASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Gm3375-201ENSMUST00000203929 796 ntBASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdhr3Q8BL00 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms