Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh20Q8BIZ0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Gm16061-201ENSMUST00000122167 857 ntBASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdh20Q8BIZ0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh20Q8BIZ0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh20Q8BIZ0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh20Q8BIZ0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh20Q8BIZ0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh20Q8BIZ0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Gm13474-201ENSMUST00000122466 815 ntBASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Mir5130-201ENSMUST00000175160 84 ntBASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh20Q8BIZ0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 AC120002.2-201ENSMUST00000220205 773 ntBASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh20Q8BIZ0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh20Q8BIZ0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh20Q8BIZ0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms