Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf38Q8BI21 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Mir5122-201ENSMUST00000175004 89 ntBASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Gm3375-201ENSMUST00000203929 796 ntBASIC15.81■□□□□ 0.12
Rnf38Q8BI21 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf38Q8BI21 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf38Q8BI21 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Prob1-201ENSMUST00000097619 3021 ntBASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Odf3b-204ENSMUST00000227834 930 ntBASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf38Q8BI21 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
Rnf38Q8BI21 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms