Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn3bQ8BHK2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn3bQ8BHK2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Prob1-201ENSMUST00000097619 3021 ntBASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Scn3bQ8BHK2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Gm24841-201ENSMUST00000158676 357 ntBASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Gm17661-201ENSMUST00000170317 270 ntBASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Gm2559-201ENSMUST00000201323 363 ntBASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scn3bQ8BHK2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 Gm37025-201ENSMUST00000195159 829 ntBASIC15.25■□□□□ 0.03
Scn3bQ8BHK2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms