Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npas4Q8BGD7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npas4Q8BGD7 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Gm6736-201ENSMUST00000166583 948 ntBASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Gm27628-201ENSMUST00000184911 107 ntBASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npas4Q8BGD7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Npas4Q8BGD7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Npas4Q8BGD7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npas4Q8BGD7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Gm14494-201ENSMUST00000118786 435 ntBASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Gm9727-201ENSMUST00000161387 555 ntBASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Gm2756-201ENSMUST00000195851 400 ntBASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Npas4Q8BGD7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Npas4Q8BGD7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Mir6404-201ENSMUST00000183699 94 ntBASIC17.17■□□□□ 0.34
Npas4Q8BGD7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Npas4Q8BGD7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms