Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Gm12497-201ENSMUST00000138778 237 ntBASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp6nlQ80XC3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Gm15173-201ENSMUST00000122049 433 ntBASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Gm11780-201ENSMUST00000136880 516 ntBASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Gm6089-201ENSMUST00000197666 938 ntBASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Gm15590-201ENSMUST00000078419 552 ntBASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp6nlQ80XC3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Gm4459-201ENSMUST00000118750 468 ntBASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Gm15467-201ENSMUST00000120582 445 ntBASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 AV026068-213ENSMUST00000223675 1171 ntBASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp6nlQ80XC3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Usp6nlQ80XC3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.02■□□□□ 0.47
Usp6nlQ80XC3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Gm8097-201ENSMUST00000117903 829 ntBASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp6nlQ80XC3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Gm36967-201ENSMUST00000193814 266 ntBASIC18■□□□□ 0.47
Usp6nlQ80XC3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 AC154222.1-201ENSMUST00000223882 475 ntBASIC18■□□□□ 0.47
Usp6nlQ80XC3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18■□□□□ 0.47
Usp6nlQ80XC3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms