Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Gm26039-201ENSMUST00000158152 144 ntBASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Gm18959-201ENSMUST00000208954 655 ntBASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc116Q80X53 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc116Q80X53 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Mir6982-201ENSMUST00000184354 68 ntBASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc116Q80X53 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc116Q80X53 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Gm29707-201ENSMUST00000196325 491 ntBASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc116Q80X53 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ccdc116Q80X53 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccdc116Q80X53 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc116Q80X53 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Ccdc116Q80X53 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc116Q80X53 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc116Q80X53 Gm15442-201ENSMUST00000117905 1527 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms