Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim62Q80V85 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim62Q80V85 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim62Q80V85 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim62Q80V85 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim62Q80V85 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim62Q80V85 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim62Q80V85 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim62Q80V85 Gm27357-201ENSMUST00000183754 135 ntBASIC16.93■□□□□ 0.3
Trim62Q80V85 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim62Q80V85 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim62Q80V85 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim62Q80V85 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Rprl3-201ENSMUST00000157400 290 ntBASIC16.92■□□□□ 0.3
Trim62Q80V85 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
Trim62Q80V85 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.92■□□□□ 0.3
Trim62Q80V85 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trim62Q80V85 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim62Q80V85 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim62Q80V85 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim62Q80V85 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Trim62Q80V85 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim62Q80V85 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Gm13312-201ENSMUST00000119631 718 ntBASIC16.91■□□□□ 0.3
Trim62Q80V85 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim62Q80V85 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.91■□□□□ 0.3
Trim62Q80V85 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.91■□□□□ 0.3
Trim62Q80V85 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim62Q80V85 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim62Q80V85 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim62Q80V85 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim62Q80V85 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.9■□□□□ 0.3
Trim62Q80V85 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim62Q80V85 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim62Q80V85 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim62Q80V85 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim62Q80V85 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim62Q80V85 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim62Q80V85 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim62Q80V85 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim62Q80V85 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim62Q80V85 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms