Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slit1Q80TR4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slit1Q80TR4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Slit1Q80TR4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slit1Q80TR4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slit1Q80TR4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slit1Q80TR4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.83■□□□□ 0.93
Slit1Q80TR4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.83■□□□□ 0.93
Slit1Q80TR4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Slit1Q80TR4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
Slit1Q80TR4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.82■□□□□ 0.92
Slit1Q80TR4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Slit1Q80TR4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slit1Q80TR4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slit1Q80TR4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slit1Q80TR4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Gm15920-201ENSMUST00000118998 402 ntBASIC20.8■□□□□ 0.92
Slit1Q80TR4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Gm17968-201ENSMUST00000194902 784 ntBASIC20.8■□□□□ 0.92
Slit1Q80TR4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.8■□□□□ 0.92
Slit1Q80TR4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slit1Q80TR4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Slit1Q80TR4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Slit1Q80TR4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slit1Q80TR4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.78■□□□□ 0.92
Slit1Q80TR4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slit1Q80TR4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slit1Q80TR4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slit1Q80TR4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slit1Q80TR4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slit1Q80TR4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms