Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdh19Q80TF3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdh19Q80TF3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Birc2-201ENSMUST00000054878 378 ntBASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.03■□□□□ 0.16
Pcdh19Q80TF3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdh19Q80TF3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh19Q80TF3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh19Q80TF3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh19Q80TF3 Gm34391-201ENSMUST00000203706 907 ntBASIC16.02■□□□□ 0.16
Pcdh19Q80TF3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdh19Q80TF3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdh19Q80TF3 Gm7461-201ENSMUST00000058918 827 ntBASIC16.02■□□□□ 0.16
Pcdh19Q80TF3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh19Q80TF3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh19Q80TF3 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.02■□□□□ 0.15
Pcdh19Q80TF3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh19Q80TF3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdh19Q80TF3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh19Q80TF3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh19Q80TF3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdh19Q80TF3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdh19Q80TF3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdh19Q80TF3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms