Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rpap1Q80TE0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Rpap1Q80TE0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rpap1Q80TE0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rpap1Q80TE0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rpap1Q80TE0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Gm27300-201ENSMUST00000184085 97 ntBASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Gm27335-201ENSMUST00000184758 97 ntBASIC25.24■■□□□ 1.63
Rpap1Q80TE0 AC117588.1-201ENSMUST00000228510 999 ntBASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rpap1Q80TE0 Gm42900-201ENSMUST00000197184 2167 ntBASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Rpap1Q80TE0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Gm14701-201ENSMUST00000117156 348 ntBASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Gm14057-201ENSMUST00000120631 482 ntBASIC25.22■■□□□ 1.63
Rpap1Q80TE0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 AC124549.3-201ENSMUST00000225541 367 ntBASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Rpap1Q80TE0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rpap1Q80TE0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Rpap1Q80TE0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC25.2■■□□□ 1.63
Rpap1Q80TE0 Gm45167-201ENSMUST00000208007 322 ntBASIC25.2■■□□□ 1.63
Rpap1Q80TE0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC25.2■■□□□ 1.63
Rpap1Q80TE0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Rpap1Q80TE0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Rpap1Q80TE0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
Rpap1Q80TE0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Rpap1Q80TE0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Gm4899-201ENSMUST00000178708 719 ntBASIC25.2■■□□□ 1.62
Rpap1Q80TE0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC25.2■■□□□ 1.62
Rpap1Q80TE0 AC159295.1-201ENSMUST00000225326 940 ntBASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rpap1Q80TE0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Rpap1Q80TE0 AC159114.1-201ENSMUST00000220349 266 ntBASIC25.19■■□□□ 1.62
Rpap1Q80TE0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms