Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm8Q6ZWM4 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.19■□□□□ 0.34
Lsm8Q6ZWM4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm8Q6ZWM4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Mir770-201ENSMUST00000103252 94 ntBASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm8Q6ZWM4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm8Q6ZWM4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Gm44430-201ENSMUST00000203376 995 ntBASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm8Q6ZWM4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Gm25016-201ENSMUST00000158399 131 ntBASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Gm10052-201ENSMUST00000168019 960 ntBASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Gm7729-201ENSMUST00000050143 801 ntBASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm8Q6ZWM4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lsm8Q6ZWM4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Gm6623-201ENSMUST00000173570 544 ntBASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Gm6659-201ENSMUST00000174752 547 ntBASIC17.14■□□□□ 0.33
Lsm8Q6ZWM4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms