Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx58Q6Q899 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx58Q6Q899 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx58Q6Q899 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Gm18195-201ENSMUST00000207604 706 ntBASIC20.19■□□□□ 0.82
Ddx58Q6Q899 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx58Q6Q899 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Gm6376-201ENSMUST00000209407 580 ntBASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx58Q6Q899 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Gm7506-201ENSMUST00000207758 815 ntBASIC20.17■□□□□ 0.82
Ddx58Q6Q899 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx58Q6Q899 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.16■□□□□ 0.82
Ddx58Q6Q899 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms