Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rif1Q6PR54 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rif1Q6PR54 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rif1Q6PR54 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rif1Q6PR54 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rif1Q6PR54 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.75□□□□□ -0.21
Rif1Q6PR54 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.74□□□□□ -0.21
Rif1Q6PR54 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Gm13365-201ENSMUST00000121188 973 ntBASIC13.74□□□□□ -0.21
Rif1Q6PR54 Gm18889-201ENSMUST00000174284 929 ntBASIC13.74□□□□□ -0.21
Rif1Q6PR54 Gm8655-201ENSMUST00000221159 852 ntBASIC13.74□□□□□ -0.21
Rif1Q6PR54 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.74□□□□□ -0.21
Rif1Q6PR54 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rif1Q6PR54 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Gm25948-201ENSMUST00000175334 112 ntBASIC13.73□□□□□ -0.21
Rif1Q6PR54 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.73□□□□□ -0.21
Rif1Q6PR54 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.73□□□□□ -0.21
Rif1Q6PR54 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.73□□□□□ -0.21
Rif1Q6PR54 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rif1Q6PR54 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rif1Q6PR54 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.72□□□□□ -0.21
Rif1Q6PR54 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.72□□□□□ -0.21
Rif1Q6PR54 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Rprl2-201ENSMUST00000157150 290 ntBASIC13.72□□□□□ -0.21
Rif1Q6PR54 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.72□□□□□ -0.21
Rif1Q6PR54 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rif1Q6PR54 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rif1Q6PR54 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rif1Q6PR54 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms