Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NfrkbQ6PIJ4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NfrkbQ6PIJ4 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.43■□□□□ 0.54
NfrkbQ6PIJ4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NfrkbQ6PIJ4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NfrkbQ6PIJ4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NfrkbQ6PIJ4 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Gm27525-201ENSMUST00000184465 107 ntBASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NfrkbQ6PIJ4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.39■□□□□ 0.54
NfrkbQ6PIJ4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NfrkbQ6PIJ4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NfrkbQ6PIJ4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
NfrkbQ6PIJ4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44357-201ENSMUST00000195897 142 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm19658-201ENSMUST00000196231 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44367-201ENSMUST00000196836 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44350-201ENSMUST00000197197 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44390-201ENSMUST00000197533 144 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44313-201ENSMUST00000198018 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44486-201ENSMUST00000198508 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44314-201ENSMUST00000199263 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44394-201ENSMUST00000199558 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44484-201ENSMUST00000199873 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44466-201ENSMUST00000200264 138 ntBASIC18.39■□□□□ 0.53
NfrkbQ6PIJ4 Gm44359-201ENSMUST00000200671 138 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms