Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Gm2399-201ENSMUST00000104944 225 ntBASIC17.52■□□□□ 0.4
CtifQ6PEE2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.52■□□□□ 0.4
CtifQ6PEE2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CtifQ6PEE2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CtifQ6PEE2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CtifQ6PEE2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CtifQ6PEE2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CtifQ6PEE2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.5■□□□□ 0.39
CtifQ6PEE2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CtifQ6PEE2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Gm13234-201ENSMUST00000120010 747 ntBASIC17.49■□□□□ 0.39
CtifQ6PEE2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CtifQ6PEE2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Gm37179-201ENSMUST00000194862 823 ntBASIC17.48■□□□□ 0.39
CtifQ6PEE2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CtifQ6PEE2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms