Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Prrt3Q6PE13 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Prrt3Q6PE13 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Prrt3Q6PE13 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44357-201ENSMUST00000195897 142 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm19658-201ENSMUST00000196231 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44367-201ENSMUST00000196836 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44350-201ENSMUST00000197197 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44390-201ENSMUST00000197533 144 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44313-201ENSMUST00000198018 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44486-201ENSMUST00000198508 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44314-201ENSMUST00000199263 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44394-201ENSMUST00000199558 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44484-201ENSMUST00000199873 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44466-201ENSMUST00000200264 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm44359-201ENSMUST00000200671 138 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm6296-201ENSMUST00000222599 943 ntBASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt3Q6PE13 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Haglr-201ENSMUST00000100000 2085 ntBASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt3Q6PE13 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prrt3Q6PE13 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Rps4l-201ENSMUST00000071745 943 ntBASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prrt3Q6PE13 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms