Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Flg-201ENSMUST00000050758 1488 ntBASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.58■□□□□ 0.08
Rnf220Q6PDX6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rnf220Q6PDX6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Gm13148-201ENSMUST00000118892 745 ntBASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rnf220Q6PDX6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Rab3c-203ENSMUST00000224180 967 ntBASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf220Q6PDX6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf220Q6PDX6 Mir8112-201ENSMUST00000184382 131 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms