Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Gm27463-201ENSMUST00000183569 57 ntBASIC18.35■□□□□ 0.53
Abcf1Q6P542 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abcf1Q6P542 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.34■□□□□ 0.53
Abcf1Q6P542 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Gm24841-201ENSMUST00000158676 357 ntBASIC18.34■□□□□ 0.53
Abcf1Q6P542 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.34■□□□□ 0.53
Abcf1Q6P542 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Abcf1Q6P542 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Abcf1Q6P542 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Abcf1Q6P542 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Abcf1Q6P542 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Abcf1Q6P542 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Abcf1Q6P542 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcf1Q6P542 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Abcf1Q6P542 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Gm17661-201ENSMUST00000170317 270 ntBASIC18.32■□□□□ 0.52
Abcf1Q6P542 Gm43799-201ENSMUST00000201845 579 ntBASIC18.32■□□□□ 0.52
Abcf1Q6P542 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Abcf1Q6P542 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.31■□□□□ 0.52
Abcf1Q6P542 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcf1Q6P542 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms