Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retreg2Q6NS82 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Gm11355-201ENSMUST00000121120 306 ntBASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Retreg2Q6NS82 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.6■□□□□ 0.41
Retreg2Q6NS82 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retreg2Q6NS82 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retreg2Q6NS82 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Actl10-202ENSMUST00000226583 1501 ntBASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Dancr-204ENSMUST00000132389 2347 ntBASIC17.58■□□□□ 0.41
Retreg2Q6NS82 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retreg2Q6NS82 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg2Q6NS82 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg2Q6NS82 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retreg2Q6NS82 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg2Q6NS82 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg2Q6NS82 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retreg2Q6NS82 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg2Q6NS82 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retreg2Q6NS82 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms