Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.65■□□□□ 0.9
Clcn1Q64347 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.65■□□□□ 0.9
Clcn1Q64347 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Clcn1Q64347 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.65■□□□□ 0.9
Clcn1Q64347 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Clcn1Q64347 Gm15590-201ENSMUST00000078419 552 ntBASIC20.65■□□□□ 0.9
Clcn1Q64347 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Clcn1Q64347 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcn1Q64347 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clcn1Q64347 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clcn1Q64347 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Clcn1Q64347 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Gm25990-201ENSMUST00000102440 86 ntBASIC20.64■□□□□ 0.89
Clcn1Q64347 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Clcn1Q64347 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Gm5264-201ENSMUST00000190584 848 ntBASIC20.64■□□□□ 0.89
Clcn1Q64347 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.64■□□□□ 0.89
Clcn1Q64347 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Clcn1Q64347 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Clcn1Q64347 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.64■□□□□ 0.89
Clcn1Q64347 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.64■□□□□ 0.89
Clcn1Q64347 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcn1Q64347 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn1Q64347 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Clcn1Q64347 Gm15173-201ENSMUST00000122049 433 ntBASIC20.63■□□□□ 0.89
Clcn1Q64347 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn1Q64347 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn1Q64347 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn1Q64347 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcn1Q64347 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.62■□□□□ 0.89
Clcn1Q64347 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.62■□□□□ 0.89
Clcn1Q64347 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Clcn1Q64347 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Clcn1Q64347 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.62■□□□□ 0.89
Clcn1Q64347 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.62■□□□□ 0.89
Clcn1Q64347 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.62■□□□□ 0.89
Clcn1Q64347 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Clcn1Q64347 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcn1Q64347 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Clcn1Q64347 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Clcn1Q64347 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.61■□□□□ 0.89
Clcn1Q64347 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.61■□□□□ 0.89
Clcn1Q64347 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.61■□□□□ 0.89
Clcn1Q64347 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcn1Q64347 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.6■□□□□ 0.89
Clcn1Q64347 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Clcn1Q64347 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Gm4995-201ENSMUST00000117247 432 ntBASIC20.6■□□□□ 0.89
Clcn1Q64347 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Clcn1Q64347 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.6■□□□□ 0.89
Clcn1Q64347 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.6■□□□□ 0.89
Clcn1Q64347 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.6■□□□□ 0.89
Clcn1Q64347 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcn1Q64347 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms