Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Vamp1Q62442 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vamp1Q62442 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Vamp1Q62442 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vamp1Q62442 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vamp1Q62442 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.06□□□□□ -0.16
Vamp1Q62442 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vamp1Q62442 Gm7291-201ENSMUST00000199147 382 ntBASIC14.06□□□□□ -0.16
Vamp1Q62442 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.06□□□□□ -0.16
Vamp1Q62442 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.06□□□□□ -0.16
Vamp1Q62442 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vamp1Q62442 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vamp1Q62442 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.05□□□□□ -0.16
Vamp1Q62442 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Prob1-201ENSMUST00000097619 3021 ntBASIC14.05□□□□□ -0.16
Vamp1Q62442 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vamp1Q62442 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vamp1Q62442 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.04□□□□□ -0.16
Vamp1Q62442 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.04□□□□□ -0.16
Vamp1Q62442 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vamp1Q62442 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.04□□□□□ -0.16
Vamp1Q62442 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Vamp1Q62442 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vamp1Q62442 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vamp1Q62442 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vamp1Q62442 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Vamp1Q62442 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vamp1Q62442 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vamp1Q62442 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Vamp1Q62442 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms