Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.91□□□□□ -0.5
Ndufa4Q62425 Gm37025-201ENSMUST00000195159 829 ntBASIC11.91□□□□□ -0.5
Ndufa4Q62425 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ndufa4Q62425 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.91□□□□□ -0.5
Ndufa4Q62425 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.9□□□□□ -0.5
Ndufa4Q62425 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Gm2559-201ENSMUST00000201323 363 ntBASIC11.9□□□□□ -0.5
Ndufa4Q62425 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ndufa4Q62425 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ndufa4Q62425 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ndufa4Q62425 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ndufa4Q62425 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ndufa4Q62425 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.89□□□□□ -0.51
Ndufa4Q62425 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ndufa4Q62425 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ndufa4Q62425 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms