Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim27Q62158 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.13■□□□□ 0.81
Trim27Q62158 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Trim27Q62158 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Gm23634-201ENSMUST00000175071 91 ntBASIC20.13■□□□□ 0.81
Trim27Q62158 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim27Q62158 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim27Q62158 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.13■□□□□ 0.81
Trim27Q62158 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim27Q62158 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Trim27Q62158 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.12■□□□□ 0.81
Trim27Q62158 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim27Q62158 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim27Q62158 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim27Q62158 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim27Q62158 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim27Q62158 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Trim27Q62158 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim27Q62158 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim27Q62158 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim27Q62158 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim27Q62158 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.1■□□□□ 0.81
Trim27Q62158 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim27Q62158 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Gm6623-201ENSMUST00000173570 544 ntBASIC20.1■□□□□ 0.81
Trim27Q62158 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim27Q62158 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Trim27Q62158 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim27Q62158 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim27Q62158 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.09■□□□□ 0.81
Trim27Q62158 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim27Q62158 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.09■□□□□ 0.81
Trim27Q62158 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim27Q62158 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim27Q62158 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim27Q62158 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim27Q62158 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.08■□□□□ 0.81
Trim27Q62158 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim27Q62158 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim27Q62158 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms