Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Gm6296-201ENSMUST00000222599 943 ntBASIC20.33■□□□□ 0.85
Irf9Q61179 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Irf9Q61179 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Irf9Q61179 Rps4l-201ENSMUST00000071745 943 ntBASIC20.33■□□□□ 0.85
Irf9Q61179 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
Irf9Q61179 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Irf9Q61179 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf9Q61179 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf9Q61179 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf9Q61179 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf9Q61179 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Irf9Q61179 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Irf9Q61179 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.32■□□□□ 0.84
Irf9Q61179 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.32■□□□□ 0.84
Irf9Q61179 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.32■□□□□ 0.84
Irf9Q61179 Gm7506-201ENSMUST00000207758 815 ntBASIC20.32■□□□□ 0.84
Irf9Q61179 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Irf9Q61179 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Irf9Q61179 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Irf9Q61179 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Irf9Q61179 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Gm44771-201ENSMUST00000206975 626 ntBASIC20.31■□□□□ 0.84
Irf9Q61179 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Irf9Q61179 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.31■□□□□ 0.84
Irf9Q61179 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Irf9Q61179 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Irf9Q61179 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Irf9Q61179 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Irf9Q61179 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.3■□□□□ 0.84
Irf9Q61179 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Irf9Q61179 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Irf9Q61179 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Irf9Q61179 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf9Q61179 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Irf9Q61179 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf9Q61179 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Irf9Q61179 Gm13216-201ENSMUST00000117145 591 ntBASIC20.29■□□□□ 0.84
Irf9Q61179 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.29■□□□□ 0.84
Irf9Q61179 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Irf9Q61179 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf9Q61179 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Irf9Q61179 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf9Q61179 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf9Q61179 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf9Q61179 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Irf9Q61179 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Irf9Q61179 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Irf9Q61179 Gm6376-201ENSMUST00000209407 580 ntBASIC20.28■□□□□ 0.84
Irf9Q61179 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Irf9Q61179 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.28■□□□□ 0.84
Irf9Q61179 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Irf9Q61179 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.28■□□□□ 0.84
Irf9Q61179 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms